Prerequisites and Dependencies

• python >= 3.8

Available from Bioconda - external tool list

Tool	Version	Publication
Fastqc	0.12.1	None
Fastp	0.23.4	Chen et al. 2018
PoreChop	0.2.4	None
bbmap	39.06	None
Prodigal	2.6.3	Hyatt et al. 2010
FragGeneScanRs	v1.1.0	Van der Jeugt et al. 2022
Prodigal-gv	2.2.1	Camargo et al. 2023
Phanotate	1.5.0	McNair et al. 2019
HMMR	3.4	Johnson et al. 2010